Resources: Analysis tools

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  1. From DNA sequences to annotation and GO enrichment Fisher test results

    16 Feb 2016 | Analysis tools | Contributor(s): Eric Normandeau

    go_enrichment annotates transcript sequences and performs GO enrichment Fisher tests. The transcript sequences are blasted against the swissprot protein database and the uniprot information corresponding to the hit is retrieved from the uniprot website. Fisher tests are performed with the...

  2. Command line Stacks Workflow

    17 Feb 2016 | Analysis tools | Contributor(s): Eric Normandeau

    An integrated workflow around the STACKS software pipeline to help streamline RAD and GBS analysesStacks Workflow is developped in Louis Bernatchez' lab.WARNINGThe software is provided "as is", without warranty of any kind, express or implied, including but not limited to the...