Tags: STACKS

All Categories (1-7 of 7)

  1. Galaxy RADseq training materials

    17 Jan 2017 | Presentation Slides | Contributor(s): yvan le bras, Anthony Bretaudeau, Gildas Le Corguillé, Cyril Monjeaud

    Introduction slides for the Galaxy RADseq training session.

    https://cesgo.genouest.org/resources/370

  2. RADseq Hackathon

    Link towards the initial GitHub page IUC Contribution Fest – RADseq Tools and Workflows Link towards the Trello Google Hangout visio for international coordination :...

    https://cesgo.genouest.org/groups/guggo/wiki/RADseqHackathon

  3. STACKS: Reference map sample datasets

    08 Mar 2016 | Datasets | Contributor(s): yvan le bras

    https://cesgo.genouest.org/resources/305

  4. STACKS: Map with BWA for Stacks sample datasets

    08 Mar 2016 | Datasets | Contributor(s): yvan le bras

    https://cesgo.genouest.org/resources/302

  5. STACKS: Process Radtags sample datasets

    08 Mar 2016 | Datasets | Contributor(s): yvan le bras

    Enzyme: Sbf1 Barcodes : ATGCT ATATC

    https://cesgo.genouest.org/resources/298

  6. Command line Stacks Workflow

    17 Feb 2016 | Analysis tools | Contributor(s): Eric Normandeau

    An integrated workflow around the STACKS software pipeline to help streamline RAD and GBS analyses Stacks Workflow is developped in Louis Bernatchez' lab. WARNING The software is...

    https://cesgo.genouest.org/resources/272

  7. STACKS populations: Run the STACKS populations program

    28 Jan 2015 | Galaxy tools | Contributor(s): yvan le bras

    The tool is available in the GenOuest Galaxy instance here This program, part of the STACKS pipeline, will be executed in place of the genotypes program when a population is being processed...

    https://cesgo.genouest.org/resources/2